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Projects BBJ

Curation of BBJ — listings under the Projects tab.

Summary Table

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GWAS & Genetics

BBJ — Quantitative traits GWAS

GWAS Quantitative Traits Cross-population
PUBMED_LINK
29403010
STAGE_PERIOD
2018
DESCRIPTION
Large-scale GWAS of 58 quantitative traits in up to 148,000 Japanese individuals. Identified 585 trait-associated loci, 118 of which were novel. Demonstrated cell-type-specific gene expression mediation and genetic correlations between Japanese and European populations.
URL
https://biobankjp.org/
TITLE
Genetic analysis of quantitative traits in the Japanese population links cell types to complex human diseases

BBJ — Cross-population atlas of 220 phenotypes

GWAS Cross-population Trans-ancestry
PUBMED_LINK
34594039
STAGE_PERIOD
2021
DESCRIPTION
Cross-population GWAS atlas integrating BBJ, UK Biobank, and FinnGen for 220 phenotypes. Identified thousands of novel loci through trans-ancestry meta-analysis, improving fine-mapping resolution with diverse ancestry. BBJ was critical for East Asian representation.
URL
https://biobankjp.org/
TITLE
A cross-population atlas of genetic associations for 220 human phenotypes

Sequencing & Beyond

BBJ — Whole-exome sequencing & rare variant analysis

WES Exome Rare Variant BRCA
PUBMED_LINK
35420638
STAGE_PERIOD
2020–2022
DESCRIPTION
Whole-exome sequencing of BBJ participants enabling rare variant association studies. Demonstrated expanded cancer risk profiles for BRCA1/BRCA2 pathogenic variants in the Japanese population, revealing population-specific pathogenic variant frequencies.
URL
https://biobankjp.org/
TITLE
Expansion of Cancer Risk Profile for BRCA1 and BRCA2 Pathogenic Variants

Study Design & Enrollment

BBJ — Project launch & initial enrollment

Launch Enrollment Japanese
STAGE_PERIOD
2003–2007
DESCRIPTION
BioBank Japan project initiated in 2003 by the Institute of Medical Science, University of Tokyo. Enrolled ~200,000 patients diagnosed with 47 common diseases from 12 medical institutions across Japan, collecting DNA, serum, and clinical information.
URL
https://biobankjp.org/

BBJ — Japanese-specific array genotyping

Array Genotyping Japonica Array
STAGE_PERIOD
2013–2015
DESCRIPTION
Genome-wide genotyping using Japanese-specific SNP arrays (Japonica Array v1/v2) designed to capture East Asian-specific variation. Included ~650,000 SNPs with enriched coverage of Japanese population variants.
URL
https://biobankjp.org/

BBJ — Study design & profile overview

Design Cohort Protocol
PUBMED_LINK
28189464
STAGE_PERIOD
2017
DESCRIPTION
Comprehensive overview of the BioBank Japan Project design, including enrollment of approximately 200,000 participants with 47 common diseases, DNA and serum collection, and prospective follow-up via medical records and disease registries.
URL
https://biobankjp.org/
TITLE
Overview of the BioBank Japan Project: Study design and profile

BBJ — Cross-sectional clinical data analysis

Clinical Data Phenotypes Comorbidity
PUBMED_LINK
28190657
STAGE_PERIOD
2017
DESCRIPTION
Cross-sectional analysis of baseline clinical data from 200,000 BBJ participants across 47 common diseases, documenting prevalence, comorbidity patterns, and clinical characteristics of the Japanese patient cohort.
URL
https://biobankjp.org/
TITLE
Cross-sectional analysis of BioBank Japan clinical data: A large cohort of 200,000 patients with 47 common diseases