Projects BBJ
Curation of BBJ — listings under the Projects tab.
Summary Table
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GWAS & Genetics
BBJ — Quantitative traits GWAS
PUBMED_LINK
STAGE_PERIOD
2018
DESCRIPTION
Large-scale GWAS of 58 quantitative traits in up to 148,000 Japanese individuals. Identified 585 trait-associated loci, 118 of which were novel. Demonstrated cell-type-specific gene expression mediation and genetic correlations between Japanese and European populations.
URL
TITLE
Genetic analysis of quantitative traits in the Japanese population links cell types to complex human diseases
BBJ — Cross-population atlas of 220 phenotypes
PUBMED_LINK
STAGE_PERIOD
2021
DESCRIPTION
Cross-population GWAS atlas integrating BBJ, UK Biobank, and FinnGen for 220 phenotypes. Identified thousands of novel loci through trans-ancestry meta-analysis, improving fine-mapping resolution with diverse ancestry. BBJ was critical for East Asian representation.
URL
TITLE
A cross-population atlas of genetic associations for 220 human phenotypes
Sequencing & Beyond
BBJ — Whole-exome sequencing & rare variant analysis
PUBMED_LINK
STAGE_PERIOD
2020–2022
DESCRIPTION
Whole-exome sequencing of BBJ participants enabling rare variant association studies. Demonstrated expanded cancer risk profiles for BRCA1/BRCA2 pathogenic variants in the Japanese population, revealing population-specific pathogenic variant frequencies.
URL
TITLE
Expansion of Cancer Risk Profile for BRCA1 and BRCA2 Pathogenic Variants
Study Design & Enrollment
BBJ — Project launch & initial enrollment
STAGE_PERIOD
2003–2007
DESCRIPTION
BioBank Japan project initiated in 2003 by the Institute of Medical Science, University of Tokyo. Enrolled ~200,000 patients diagnosed with 47 common diseases from 12 medical institutions across Japan, collecting DNA, serum, and clinical information.
URL
BBJ — Japanese-specific array genotyping
STAGE_PERIOD
2013–2015
DESCRIPTION
Genome-wide genotyping using Japanese-specific SNP arrays (Japonica Array v1/v2) designed to capture East Asian-specific variation. Included ~650,000 SNPs with enriched coverage of Japanese population variants.
URL
BBJ — Study design & profile overview
PUBMED_LINK
STAGE_PERIOD
2017
DESCRIPTION
Comprehensive overview of the BioBank Japan Project design, including enrollment of approximately 200,000 participants with 47 common diseases, DNA and serum collection, and prospective follow-up via medical records and disease registries.
URL
TITLE
Overview of the BioBank Japan Project: Study design and profile
BBJ — Cross-sectional clinical data analysis
PUBMED_LINK
STAGE_PERIOD
2017
DESCRIPTION
Cross-sectional analysis of baseline clinical data from 200,000 BBJ participants across 47 common diseases, documenting prevalence, comorbidity patterns, and clinical characteristics of the Japanese patient cohort.
URL
TITLE
Cross-sectional analysis of BioBank Japan clinical data: A large cohort of 200,000 patients with 47 common diseases