Complex Trait Genetics Catalog
Hi there, and welcome to CTGCatalog.
I'm Yunye, and I study complex trait genomics. I created this collection to bring together resources that I personally find useful for my work. Researchers who share similar interests, or anyone who wants to start studying this field, may find it useful as well.
CTGCatalog is a GWAS-focused collection for complex trait genetics, including reference data, public summary statistics, software tools, related literature, and AI-related resources. It is a personal curated collection rather than an exhaustive or official resource. AI assists with curation, while all entries are reviewed and maintained manually.
-
Biobanks & cohorts
Population studies and biobanks by world region.
-
Summary statistics
Public GWAS and omics sumstats (imaging, proteomics, transcriptomics, etc.).
-
GWAS Tools
Association tests, fine mapping, PRS, visualization, MR, and more.
-
Coding
Python stack, Conda, containers, Linux shell, workflows, and docs/site tooling.
-
References
Key papers and resources by topic (genome, variant, phenotype, and more).
-
Single cell
scRNA-seq tools: QC, annotation, trajectory, networks, harmonization.
-
Projects
Large programs (e.g. 1000 Genomes, UK Biobank, GTEx): one page per project, one card per phase.
-
AI
Biomedical AI agents and related tooling.
-
Major databases
National and regional omics archives by country (DDBJ, NBDC, NGDC / CNCB, INSDC partners, and similar).
-
Journals
Publication venues cited by the catalog, with links and metadata.
-
Tags
Tag hub and one page per tag (entries from every section). Click a tag on any card to open its page.
-
Catalog statistics
Item counts by biobank region, sumstats field, AI, GWAS tools, and more.
-
Trending
Literature trends from PubMed baseline: GWAS-related terms and journal rankings.
What's New
- 2026-06-15 — Created 7 new AI categories: Drug discovery, Protein, Imaging, Single cell, Clinical EHR, Multimodal, Benchmark — with 7 representative entries
- 2026-06-15 — Added 4 papers to AI > Auto research: AI Scientist (Lu PMID 41882133, Nature 2026), Denario (Villaescusa-Navarro arXiv 2025), CodeScientist (Jansen ACL 2025), AutoResearchClaw (AIMING Lab arXiv 2026)
- 2026-06-15 — Created AI > Auto research category; moved 5 automated discovery systems: Co-Scientist, Robin, SPARK, Virtual Lab, Biomni from AI > Agent
- 2026-06-15 — Added Hermes Agent (Nous Research, 2026) — self-improving open-source AI agent — to AI > Agent
- 2026-06-15 — Added rhyQTL (Chen PMID 40341583, Nat Commun 2025) — rhythmic QTLs for 24-hour gene expression across 45 GTEx tissues — to Sumstats > Transcriptomics > Bulk tissue