Complex Trait Genetics Catalog
Hi there, and welcome to CTGCatalog.
I'm Yunye, and I study complex trait genomics. I created this collection to bring together resources that I personally find useful for my work. Researchers who share similar interests, or anyone who wants to start studying this field, may find it useful as well.
CTGCatalog is a GWAS-focused collection for complex trait genetics, including reference data, public summary statistics, software tools, related literature, and AI-related resources. It is a personal curated collection rather than an exhaustive or official resource. AI assists with curation, while all entries are reviewed and maintained manually.
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Biobanks & cohorts
Population studies and biobanks by world region.
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Summary statistics
Public GWAS and omics sumstats (imaging, proteomics, transcriptomics, etc.).
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GWAS Tools
Association tests, fine mapping, PRS, visualization, MR, and more.
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Coding
Python stack, Conda, containers, Linux shell, workflows, and docs/site tooling.
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References
Key papers and resources by topic (genome, variant, phenotype, and more).
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Single cell
scRNA-seq tools: QC, annotation, trajectory, networks, harmonization.
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Projects
Large programs (e.g. 1000 Genomes, UK Biobank, GTEx): one page per project, one card per phase.
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AI
Biomedical AI agents and related tooling.
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Major databases
National and regional omics archives by country (DDBJ, NBDC, NGDC / CNCB, INSDC partners, and similar).
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Journals
Publication venues cited by the catalog, with links and metadata.
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Tags
Tag hub and one page per tag (entries from every section). Click a tag on any card to open its page.
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Catalog statistics
Item counts by biobank region, sumstats field, AI, GWAS tools, and more.
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Trending
Literature trends from PubMed baseline: GWAS-related terms and journal rankings.
What's New
- 2026-06-13 — Added IBDverse sc-eQTL (Alegbe PMID 42236949, Nature 2026) to Sumstats > Transcriptomics > Single-cell
- 2026-06-13 — Added Brain sc-eQTL (Haglund PMID 39794547, Nat Genet 2025) to Sumstats > Transcriptomics > Single-cell
- 2026-06-13 — Added SAGE-net (Spiro PMID 42260311, Nat Methods 2026) to Tools > Functional_prediction
- 2026-06-11 — Added 4 AI agent papers to AI > Agent: Robin (PMID 42156546), Co-Scientist (PMID 42156544), DeepRare (PMID 41708847), Virtual Lab (PMID 40730228)
- 2026-06-11 — Updated scPRS metadata (vol/issue/pages/PMCID/year) in Tools > Polygenic risk scores