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Annotation

Catalog entries using this tag (links open the entry card on its page):

Entries

FANTOM3 — Mouse gene catalog based on physical cDNAs

FANTOM3 Transcriptome Mouse Annotation
PUBMED_LINK
16683036
STAGE_PERIOD
2005–2006
DESCRIPTION
FANTOM3 transcript annotation producing the mouse gene catalog based on physical cDNAs. Extended the cDNA collection and provided comprehensive transcript annotation, distinguishing protein-coding from non-coding RNAs and revealing the complexity of the mammalian transcriptome.
URL
https://fantom.gsc.riken.jp/
TITLE
Transcript Annotation in FANTOM3: Mouse Gene Catalog Based on Physical cDNAs

FANTOM5 — Atlas of human long non-coding RNAs

FANTOM5 lncRNA CAGE Annotation
PUBMED_LINK
28241135
STAGE_PERIOD
2017
DESCRIPTION
Comprehensive atlas of 27,919 human long non-coding RNA (lncRNA) genes with accurate 5' ends defined by CAGE. Provided a high-confidence catalog of lncRNAs with detailed annotation of their expression patterns, conservation, and genomic features across diverse cell types.
URL
https://fantom.gsc.riken.jp/
TITLE
An atlas of human long non-coding RNAs with accurate 5' ends