CAGE
Catalog entries using this tag (links open the entry card on its page):
- FANTOM5 — Atlas of human long non-coding RNAs — Projects
- FANTOM5 — Promoter-level mammalian expression atlas — Projects
Entries
FANTOM5 — Atlas of human long non-coding RNAs
PUBMED_LINK
STAGE_PERIOD
2017
DESCRIPTION
Comprehensive atlas of 27,919 human long non-coding RNA (lncRNA) genes with accurate 5' ends defined by CAGE. Provided a high-confidence catalog of lncRNAs with detailed annotation of their expression patterns, conservation, and genomic features across diverse cell types.
URL
TITLE
An atlas of human long non-coding RNAs with accurate 5' ends
FANTOM5 — Promoter-level mammalian expression atlas
PUBMED_LINK
STAGE_PERIOD
2011–2014
DESCRIPTION
Flagship FANTOM5 paper: comprehensive promoter-level expression atlas across 975 human and 152 mouse samples using CAGE (Cap Analysis of Gene Expression) sequencing. Identified and quantified promoter usage across diverse cell types, revealing the core promoter architecture of the mammalian genome.
URL
TITLE
A promoter-level mammalian expression atlas